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1. They use interprocedural analysis, which is not compatible with separate compilation.
gcj -c Main.java gcj -c Foo.java
You're doing it wrong. gcj -c Main.java Foo.java -o bar.o
This distinction is what I was referring to when I wrote "separate compilation".
I guess if you're going to recompile the entire JDK every time you change one line in your app, then this would work.
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