Re: g++ libstdc++ linker question.

[Jonathan Wakely <jwakely dot gcc at gmail dot com>]

On 30 April 2012 18:28, Jonathan Wakely <jwakely.gcc@gmail.com> wrote:
> On 30 April 2012 13:39, F. Heitkamp wrote:
>> People will tell me to ask on matplotlib list but I believe this a more
>> generic GNU C++ question.
>> I have been trying to run matplotlib that I built from source on my linux
>> from scratch like box.
>>
>> When I try to run an example I get:
>>
>> bash-4.2$ python2.6 matplotlib-ex1.py
>> Traceback (most recent call last):
>> ?File "matplotlib-ex1.py", line 13, in <module>
>> ? ?import matplotlib.pyplot as plt
>> ?File "/usr/lib/python2.6/site-packages/matplotlib/pyplot.py", line 23, in
>> <module>
>> ? ?from matplotlib.figure import Figure, figaspect
>> ?File "/usr/lib/python2.6/site-packages/matplotlib/figure.py", line 16, in
>> <module>
>> ? ?import artist
>> ?File "/usr/lib/python2.6/site-packages/matplotlib/artist.py", line 6, in
>> <module>
>> ? ?from transforms import Bbox, IdentityTransform, TransformedBbox,
>> TransformedPath
>> ?File "/usr/lib/python2.6/site-packages/matplotlib/transforms.py", line 34,
>> in <module>
>> ? ?from matplotlib._path import affine_transform
>> ImportError: /usr/lib/python2.6/site-packages/matplotlib/_path.so: undefined
>> symbol:
>> _ZSt16__ostream_insertIcSt11char_traitsIcEERSt13basic_ostreamIT_T0_ES6_PKS3_i
>>
>> I see this symbol is in 32 bits libstdc++ library, but does not seem to
>> appear in 64 bits versions.
>
> Right, the equivalent symbol in the 64-bit lib ends in _l instead of _i
>
>> bash-4.2$ ldd /usr/lib/python2.6/site-packages/matplotlib/_path.so
>> ? ?linux-gate.so.1 => ?(0xffffe000)
>> ? ?libpython2.6.so.1.0 => /usr/lib/libpython2.6.so.1.0 (0xf74f7000)
>> ? ?libgcc_s.so.1 => /lib/libgcc_s.so.1 (0xf74de000)
>> ? ?libpthread.so.0 => /lib/libpthread.so.0 (0xf74c4000)
>> ? ?libc.so.6 => /lib/libc.so.6 (0xf7367000)
>> ? ?libdl.so.2 => /lib/libdl.so.2 (0xf7362000)
>> ? ?libutil.so.1 => /lib/libutil.so.1 (0xf735e000)
>> ? ?libm.so.6 => /lib/libm.so.6 (0xf7338000)
>> ? ?/lib/ld-linux.so.2 (0xf77d1000)
>>
>> libstdc++ is not shown as being linked with _path.so
>>
>> Any thoughts?
>
> Is _path.so a 32-bit or 64-bit library? ?From the missing symbol I'm
> asuming 32-bit.
>
> It would appear it wasn't correctly linked, so its dependency on
> libstdc++.so isn't recorded in the library by a DT_NEEDED entry.

P.S. you can check the DT_NEEDED tags by running:

readelf -d  /usr/lib/python2.6/site-packages/matplotlib/_path.so


> Does it help if you tell the dynamic linker to preload libstdc++.so?
>
> LD_PRELOAD=/usr/lib/libstdc++.so python2.6 matplotlib-ex1.py

The matplotlib I use is built with:

python setupegg.py build_ext \
  --rpath=/opt/gcc-4.4.3/lib64
python setupegg.py build
python setupegg.py install --user

The --rpath option ensures the right libstdc++.so is found at runtime
(we have several installed).  That build works here, and is linked to
libstdc++.so.  Unfortunately it builds matplotlib as a python egg,
which is a very annoying package format.  I'd rather not install it
via egg, but have no experience doing so and can't suggest why your
build was not linked to libstdc++.